AAGAACTTTA AAGAGCTTCT TTGGGAAAAA CCCAATTTGA AACAGCTTCA AATGGCCAAA GACTAATTAA ACGCTATCAG ATAAAAATAC ATGAATGTAT AATGAAATTT TGACAATAAA TCAATTTGTC ATCAGTGAAC CAACTCTTTA ATATGAAAAT GAGACTTTTC TGTGTGCTGT GCTGAGATTG GCTGAGTATC Y GGTACTGGGA ATACAATCAT CAAATATATG TGCTGATGGT ACTGGAAGAC AGGGGTGGGG AAGGAGAGGG GGTGGTCTGA GAAGTAACTG GGTCTGATGA GCTGTGGCCT CAGCAGGATG TCCCTCGCTC TGGCTTTGTG ATGGGTGGAT GACACACCCA GCTCCTTTAA ATCACACCGC CTCTAGAAGA ATGGGTGATA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51448612 | NES14439942 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | C | T | T | T | C | T | T | C | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36294665 | SNP | T | T | T | T | T | T | C | T | T | T | C | T | T | C | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51448612 | NES14439942 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr3:30778305 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr374761 | regulatory region 374761 | within coordinates | ||||||
Rr574818 | regulatory region 574818 | 1497 bp distal | ||||||
Rr574819 | regulatory region 574819 | 1557 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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