rs36293055 SNP Detail

Summary

• ID
  rs36293055
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149085739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGGCAAA GCGCAGAATT
  GGATTTACAA AGATAAGATT GCTATATAAA ACCGAATGCA TCATTCTATA TTTGATAAAA
  AGTTAGTAAC GCTGCATTTT GCTACAAAGC CAATGCCACT AGTATAAGGC ACCGGAAGGA
  AACAATCTGC GGAAGAGGAA GCAGGACTAG TAAACAAACA TGGGAGAGCT TGCCCAGTTC
  R
  TTACTAGTCA ATGAAATGCA AATTAAACTT ACACTGGAAA AAAATTAGTT TGTAGTCTAT
  GCTTCTTAAA ACAACCCCCA TCCCCAAACC CCTAAAGCTG GCACAGTCTG GGGAGATTTC
  TGCATTGTGG GAAGAATGTG CGGTTGCTTA AAAGAGGAAC CAGCTATCAG CATCTGCTCC
  GCTCAACCCG TTCTCCAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51053008	NES13894721	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36293055					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51053008	NES13894721	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149085739 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Gm64772	predicted gene, 64772	1084 bp upstream
Rr587318	regulatory region 587318	within coordinates
Rr587319	regulatory region 587319	1418 bp proximal