rs36293036 SNP Detail

Summary

• ID
  rs36293036
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:33690107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATGTTTA GGAGCAGCCC
  CCACAGCGGT TGCTAACACC TGGTCTTTGG GAAGGTGCCA CTGTCACTGC AACTTAGGCA
  GCAGAGCACA GAGCACTTCA GTATTGAATC AAACCACCAA GTCCCTCTCT GTATTAAAGT
  AGTTCTCATT GCATTAATTG AAGTTACTTC TTTTTTTTTT TTTTTTTTTT CTGTTTAGAA
  M
  AATCTTAAAT TGGGGTAGCC CCTGTGGTGG TTGTTATCCT AAGTTGTTCG TGACCTCTGT
  TGTAAGCATC ATTATAACAA GACAATAAAG TATTCTTTGA AGGAAACTAA GCCATGAGAT
  ACAAACCTTT GCTTATGGAA GTTTAAAATC TTAGATTGTC AAAATGTTAA GGTTCATAGA
  GATTATCTAG TCCAATTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51595803	NES14852434	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36293036					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51595803	NES14852434	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33690107 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exoc4	exocyst complex component 4			Intron
				Noncoding-Transcript-Variant
Rr628208	regulatory region 628208			939 bp distal
Rr628209	regulatory region 628209			77 bp distal