rs36284368 SNP Detail

Summary

• ID
  rs36284368
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:76040109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGTCCCAA AGGTTTCATA
  TCTTACCATA ATAGCACCAA TAGCCAGAGA CTAAGTATTT AGACATGTGA ACTTGTGAGG
  GACATTTCCC ATTGTACTAT GACACTGGTC TCCGACCTGG AGTGACCCCT ATAATTCCAG
  AATTTACTTG GTACACACTA AGTGCTCAAT AAAACCCAGC GCCTTACAAA TCCATTTGAT
  R
  AATAACTGAA CAGAAAAAAG AAGCTAAAAT TAGTAGGAAA AGAATTATCA AGAGCAAGGA
  GCAAAATCCC CACTAGGAAG AAAAGATTCT CACAGGATAG ATAACACTGC CACTTGAGTT
  TTTATTTAGG ACACTCTGAC CTTGGTAGTG ACCTGGATTC AAAAAGGAGT GTGGCTGCCT
  ATATTAGCCT GACCTGACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51745811	NES14733870	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36284368					SNP	G	G	G	A	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51745811	NES14733870	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:76040109 () rs orientation: forward

Symbol	Name	Function Class
Gm73081	predicted gene, 73081	within coordinates
Rr613502	regulatory region 613502	1892 bp distal
Rr613503	regulatory region 613503	733 bp distal
Rr613504	regulatory region 613504	620 bp proximal
Rr613505	regulatory region 613505	1038 bp proximal