rs36278913 SNP Detail

Summary

• ID
  rs36278913
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130590392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGTGGCT GCCTCTGACA
  CATAGCCAAT TGGCAGACAT TGCTCCCGGG TCCCCCTCAG CGGTTTGCTC TTCTAAAACC
  GGAAGAAAGC ACACAGGAGT CCCCCTTTGC ATGCCCCAGT GACCTATGTG AGTGAATGCT
  GTTTTATTTC CTGTTTCTGT TAGACTATAT GTGGCACTTT CCCCACTGTT TCCTCAGTCC
  Y
  AATCACCCAC ATGTCTCAGA AGAGTGCCGG AACCCGGGTG ATTACACTCT GTGGATATCG
  GAGCCAGTGG GCGTTGGTTT GTCAGGCGCA GGCATATTAG CAGATAACAG AGAACTGCTT
  AGGCACACAC ACTTAATTGG TTACTTTTAG TCACACACAT ACCTAGTTTA ATGAGAATCA
  CTCTTCAGTT GATATGAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51638243	NES14658274	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36278913					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51638243	NES14658274	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130590392 () rs orientation: forward

Symbol	Name	Function Class
Gm36443	predicted gene, 36443	within coordinates
Gm66061	predicted gene, 66061	1504 bp upstream
Rr585211	regulatory region 585211	within coordinates