rs36265907 SNP Detail

Summary

• ID
  rs36265907
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117384590 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCACACAA TTAAGCAATT
  CTCAAAAATC AATTAGCCAT ATGCTGTAAG TAGGATGACA TGTTTTTATA ACTTCTCCCT
  GGATGTTTTA TTGCCAGAGG ATGCTCATGT GGGCATTGGA ACAAGAAAAT AAAACACCAG
  CCGGAGAGTC AAAGTGCAGA ACTCCAGCCA TGATTAATTA AGAGTCCGAT CTGGAAAGCC
  Y
  GGGGTCGCTG AGCAGGCAGC AGGCCTTGGA AGACTGCTCT CCCGGTGCCC ACATTCTGTT
  GCAAAAGTCT CCCCCGCTCC CGCCCTCGCC CCCATTTCTC TTTGTTTTCT CTGTTCTTTT
  TAATTTAGCA CAGATACAGC TGTGAAAACT GCATATTCCA TTTGAACTCC ATATTGATGC
  TTCTAGCCGG AAGGTTCCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51409471	NES13709161	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36265907					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51409471	NES13709161	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117384590 () rs orientation: forward

Symbol	Name	Function Class
Gm67591	predicted gene, 67591	1646 bp upstream
Rr637316	regulatory region 637316	within coordinates
Rr637317	regulatory region 637317	1431 bp proximal
Rr637318	regulatory region 637318	1496 bp proximal