GCTGGGTGTG GTTTCACTTA AGCCGTTATT AAGGTAATTA GGTCCCAGAA AAATAAATAC ATCCCTCCTG CAGTGTGCAT CTAAGATGCG TGGAAAGGAA GCAGCCACTG GAAACATCCA AAGAGAACTC CTTCGAACAA GTAAGGGGAA GAGACGGAAG GCCTCCCCAC CGATTCCCAC AACCGAGCTC CGCCCACCTT M TCGCAGCCTG CCCCATCCAC TCGAAGAGTT GTCTAAGCTC TACAAGTGCC AGGCGCTGCT GGGAAAGAGG GTAAATAATG GGCCGCAAAC TCTATTATGC TTTTTTTCTT CACATCTTAT AGAGGCTGTT GGAATGAAGA AAATAAAAAT TAATGCAAGA GTGTTTTGTT GTTATGCCTT TTATGCCGTT ACTGGACACT M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51655820 | NES14643873 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36255230 | SNP | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51655820 | NES14643873 | PERLEGEN | MM_PANEL | f | SNP | A/C |
Location: Chr3:143871398 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm34162 | predicted gene, 34162 | within coordinates | ||||||
Rr586590 | regulatory region 586590 | 1494 bp distal | ||||||
Rr586591 | regulatory region 586591 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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