AATAAACAGT GTTTCAGGGC TTCTCTCCTT CACTGAAGGG CTAGCGAAAG AATTCTGGGA AGTCTTCCTC TCTAGAGGGT TCAGTGCCAA TGGCCTTTGA GTATAAACAG TACTAAGTTT AGAATTTGTG TATATCTCAA CTTAACCTCA GCTCATGGTT ATCACAACAA AGAACTCCGA TACATGGTTT CTACTCCTTA S AACTCTCCAT AGCTTTGAAT GTTACATCCT GCCTATCTTC GTGAAGTATA TACCAAAAGA GAAGAGGGCT TACAATGAAC AAGTTATGCA CACGAAGCAG ATGCTGTCAT TTCTGTTTGT AATGAGAGGC ATTTTTGTTT GACTGTAGAG AGGTTTTTTA AAAATTATTT TAATATATGA AATTGTAAGG AAAAAAATTA S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51616847 | NES14661536 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36252684 | SNP | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51616847 | NES14661536 | PERLEGEN | MM_PANEL | f | SNP | C/G |
Location: Chr3:127740960 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
9830132P13Rik | RIKEN cDNA 9830132P13 gene | within coordinates | ||||||
Rr398010 | regulatory region 398010 | 1710 bp upstream | ||||||
Rr584909 | regulatory region 584909 | 1123 bp proximal | ||||||
Rr584910 | regulatory region 584910 | 1562 bp proximal | ||||||
Rr584911 | regulatory region 584911 | 1789 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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