rs36251871 SNP Detail

Summary

• ID
  rs36251871
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108729711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATGTGGA AAGTTGTCTA
  AAAAATGAGT CACCTGGCAC CAAAAAAACA TTTATGCACA GACTTCCACC CCACACCCCC
  CACACTCTCC CCCTCCCCGC AACCCATATC TTAGCATCAA CAAAACGGCT CTGCTGGCTT
  GTAAATTCTG AGAAGTCTGG GAGAACAAGG GTTCCCCCAA GTGGTGTGTG GTTATTCGTC
  S
  TCTACTACAA AGCATAGGTT TCCTGAAACC TCACTGTTAC CCTTGTATTT TAAAGATGTT
  TTAGGGTGCA TGGTGGACAA AATGGGATTT TAACTCTGAA TGCATGTGTA CTGGCTGCGT
  CCAACTCCTT TGGGTGTCTT TCTCATCTCA TGCTCAGATA TCATATTTGC ATGCATGCAT
  TTGTTCTTAT TCATGTATTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss51809753	NES14772840	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G			G		C
ss133508758	ENSMUSSNP547785	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G				C
ss321893987	CHEV_6_108702744	CHEVERUD	SCREENING_POP	f	SNP							G		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs36251871					SNP	C	G	G	G	G	C	G	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51809753	NES14772840	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108729711 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	12 bp distal
Rr636194	regulatory region 636194	1155 bp proximal