rs33892232 SNP Detail

Summary

• ID
  rs33892232
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:89229212 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCCCTCTG GAGACCCAGT AGCTTCGGTG AGCGTCCTGG
  GAACGCTCGA GCGCTAGCGC CTGGGAACCG CACCGCCGGC ACAGACGACT CACGCCGGGT
  R
  GGGAGCCCGC AGGCACTGAG CTGCAGCGTT CTGCACCGCC GCCGGCCCCG CCCCCTCAGA
  CCACGCCTGC TCTCTAACCC CTCCCCCACA CTTGGTGAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45712488	mCV23376948	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss146947808	ENSMUSSNP7184929	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss321204813	CHEV_4_88956884	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33892232					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:89229212 () rs orientation: forward

Symbol	Name	Function Class
Cdkn2b	cyclin dependent kinase inhibitor 2B	mRNA-UTR
Cpgi14441	CpG island 14441	within coordinates
Gm12610	predicted gene 12610	within coordinates
Rr376809	regulatory region 376809	1878 bp downstream
Rr398336	regulatory region 398336	within coordinates
Rr595183	regulatory region 595183	328 bp distal
Rr595184	regulatory region 595184	54 bp proximal
Rr595185	regulatory region 595185	199 bp proximal
Rr595186	regulatory region 595186	269 bp proximal
Tssr42412	transcription start site region 42412	within coordinates
Tssr42413	transcription start site region 42413	46 bp downstream