rs33891770 SNP Detail

Summary

• ID
  rs33891770
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:89228218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGT ATCTCAATTT GTCCCTAAAT
  R
  AATGTTTAGG GAACCTCTTT GTCGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45632814	mCV23376967	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss146947787	ENSMUSSNP4049135	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321204808	CHEV_4_88955890	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33891770					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:89228218 () rs orientation: forward

Symbol	Name	Function Class
Cdkn2b	cyclin dependent kinase inhibitor 2B	Intron
Cpgi14441	CpG island 14441	438 bp proximal
Gm12610	predicted gene 12610	within coordinates
Rr376809	regulatory region 376809	884 bp downstream
Rr398336	regulatory region 398336	972 bp upstream
Rr595183	regulatory region 595183	645 bp proximal
Rr595184	regulatory region 595184	1048 bp proximal
Rr595185	regulatory region 595185	1193 bp proximal
Rr595186	regulatory region 595186	1263 bp proximal
Tssr42412	transcription start site region 42412	978 bp downstream
Tssr42413	transcription start site region 42413	1040 bp downstream