CAATAACCTT TTTCTTTCTT TTGGCGAGGT AAGGGCTGTT TTTACAGCGG CAAAAAGATT TAAAAGTTTT TAGTAAAAGC CATAAATAAA ATTTTTTATA M GGTCTTTATA CTCACTTTAC AATTTTTTTT TAACTTTTAA AAAATTCTTT TGTTAAACAC CCCTTTTTCA TAAAAACTGA AGAGAAATGG TACCTTTCC M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss45571935 | mCV23376988 | ABI | CRAMUS_MOUSE | f | SNP | A | C | A | ||
ss146947761 | ENSMUSSNP1192364 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | |||
ss321204803 | CHEV_4_88955643 | CHEVERUD | SCREENING_POP | f | SNP | A | A | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs33891414 | SNP | A | C | A | A | A |
Location: Chr4:89227971 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cdkn2b | cyclin dependent kinase inhibitor 2B | Intron | ||||||
Cpgi14441 | CpG island 14441 | 685 bp proximal | ||||||
Gm12610 | predicted gene 12610 | within coordinates | ||||||
Rr376809 | regulatory region 376809 | 637 bp downstream | ||||||
Rr398336 | regulatory region 398336 | 1219 bp upstream | ||||||
Rr595183 | regulatory region 595183 | 892 bp proximal | ||||||
Rr595184 | regulatory region 595184 | 1295 bp proximal | ||||||
Rr595185 | regulatory region 595185 | 1440 bp proximal | ||||||
Rr595186 | regulatory region 595186 | 1510 bp proximal | ||||||
Tssr42412 | transcription start site region 42412 | 1225 bp downstream | ||||||
Tssr42413 | transcription start site region 42413 | 1287 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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