About   Help   FAQ
rs33891414 SNP Detail
Summary
  • ID
    rs33891414
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr4:89227971 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          CAATAACCTT TTTCTTTCTT TTGGCGAGGT AAGGGCTGTT
    TTTACAGCGG CAAAAAGATT TAAAAGTTTT TAGTAAAAGC CATAAATAAA ATTTTTTATA
    M
    GGTCTTTATA CTCACTTTAC AATTTTTTTT TAACTTTTAA AAAATTCTTT TGTTAAACAC
    CCCTTTTTCA TAAAAACTGA AGAGAAATGG TACCTTTCC                       
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
C57BL/6J
DBA/2J
LG/J
SM/J
ss45571935 mCV23376988 ABI CRAMUS_MOUSE f SNP A C A
ss146947761 ENSMUSSNP1192364 ENSEMBL ENSEMBL_Sanger f SNP A A
ss321204803 CHEV_4_88955643 CHEVERUD SCREENING_POP f SNP A A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
C57BL/6J
DBA/2J
LG/J
SM/J
rs33891414 SNP A C A A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:89227971 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cdkn2b cyclin dependent kinase inhibitor 2B Intron
Cpgi14441 CpG island 14441 685 bp proximal
Gm12610 predicted gene 12610 within coordinates
Rr376809 regulatory region 376809 637 bp downstream
Rr398336 regulatory region 398336 1219 bp upstream
Rr595183 regulatory region 595183 892 bp proximal
Rr595184 regulatory region 595184 1295 bp proximal
Rr595185 regulatory region 595185 1440 bp proximal
Rr595186 regulatory region 595186 1510 bp proximal
Tssr42412 transcription start site region 42412 1225 bp downstream
Tssr42413 transcription start site region 42413 1287 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory