rs33890861 SNP Detail

Summary

• ID
  rs33890861
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104626832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCGACTG CTCTTCCGAA
  GGTTCGGAGT TCAAATCCCA GCAACCACAT GGTGGCTCAC AACCATCCGT AACAAAATCT
  GACTCCCTCT TCTGGATTGT TTGAAGACAG CTACAGTGTA CTTACATATA ATAAATAAAT
  AAATCTTAAA AAAAAAAAAA AAAAAAAAAG AAGACAGCTG GTCATGGTGG CCCATAGCTG
  K
  GATCCCAACA CTTAGGAGGC AGAGGCAGGG GCATTACTGC AAGTTCAGCC GGCCAGGAGT
  ACATAGGGAG ACTATGCCTC AAAAAGAGAG CTGGAGAGAT GGCTCAGAAG TTGACCACTG
  GCTGATTTTT CAGAGGGCCC AAGTTAATTG CCAGCATCCA CATCTGTATG TAATTCCAGT
  TACAAGGGAC CCAACACCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45450236	mCV23791963	ABI	CRAMUS_MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33890861					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104626832 () rs orientation: forward

Symbol	Name	Function Class
Rr582589	regulatory region 582589	694 bp proximal