rs33890037 SNP Detail

Summary

• ID
  rs33890037
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:113783836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATATATTCAA TGACTCAGCA CTTTCTCTAT TTCTGTCTTC TCTGATAACT TATGACAAAG
  ATACTAGGAG TAAATGTCCT TAATTCAAAA TTTCTAGGTC TGAAATTCGT AATTATTACT
  GGAAGCTTAC TAAGTCAGGA CTCTCACCAT GATCTATCTT ACTGTATGAA ACAATTGTGA
  TGTGTGTTCA AGATTAAAGG ATATGATGAT AATTAGCAGC GCCAACCATC AAATAGCCAT
  TTCCTTTTCT TTGAGTTTTT CAGGCAAGCT GCTTAAGAGT CTATTGGACT CCTAGCTTTG
  M
  CTCATGAATA TGTCTTCAAC CAGCATGATC AAAAAGACAA CTCTTTGAAA TACTCAAAGA
  GGCATAGTTC GTTGATGCAT TTATAAATAT TTATAAAAAA TTTTGTGTGA GCGAGGCTTT
  TATTGAAAAT CTTTAAAGTG TTCTGATTTT GAAAATGTTA TTTCCAAAAC AACGTTGAAA
  TTGCTTTAGA AGATTCATTG GACTTTTTAG GGTAGAAACA TGAAAGGGCT ACATCCAATA
  TCACGTGAAA AATACTGGTA AGAATATTAG CAGCGTATAT TGGTGTGGTG AGTAAATGTG
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45259270	mCV23813385	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs33890037					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:113783836 () rs orientation: forward

Symbol	Name	Function Class
Gm39909	predicted gene, 39909	within coordinates
Rr562808	regulatory region 562808	639 bp distal