rs33889811 SNP Detail

Summary

• ID
  rs33889811
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:113748147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATACAACTTC TTCTCAGCAC CTCATAGTTC CTTCTCCAAA ATTGACTATA TAATTGGTCA
  TAAAACAGGC CTCAACAGAT ATAAGAAGAT TGAAATAATC TCATGCATCC TATCACATCA
  CCTATCCTAT CACATGGATT AAGGCTGGTC TTCAATAACA GTAAAAACAA CAGAAAGCCC
  ACATACACAA GGAAGCTGAA CAACTCTCTA TTCAATGATA ACTTGGTCAG GGAAGAAATA
  AAGAAATTAA AGACTTCTTG GAATTCAATG AAAATGATGA CACAGCATAC CCAAACTTAT
  R
  GGACACAATG AAAGCAGCTC TCAGCGGAAA ATTCAAAGCA CTAAGTGTCC TGGTAAAAAA
  ATGTGTAAGC AGACATGATG TAGAGAAGAA GCTGAGAGAT CTACATCATG ATCCAGAGTA
  AACAGAGAGA ACTGACTTGA GCTTCTGAGA CTTCAAAGCC AGCCCCAACA GTGATACACT
  TCCTCCAACA AGACACTCCA CAACCACTCC AACAAGGCCA CATTTCCTAA TAATGTCACT
  TCCTATGGAC CAAGCATTTA AACACATGAA GTCTATGGGA GCCATTCCTA ATCAAACCAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45206199	mCV23812021	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33889811					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:113748147 () rs orientation: forward

Symbol	Name	Function Class
Gm75060	predicted gene, 75060	within coordinates
Rr562806	regulatory region 562806	1801 bp proximal