rs33861838 SNP Detail

Summary

• ID
  rs33861838
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133455314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTCTTTGC TATTAAACAG
  GATGACCAAA GGTGTTGTGA AGTAACAGAC CCTCCCCAGC CCTGCCCCTT TGGTCACCTG
  GATTTGTCAC TCACTGTTCA TGCCTGTCTC CAGGCTGTTG CTGTATCTCC AGCCCTCCAG
  GACCCATGCT GATGGCGCAG TTTCAGTGAC AGAGAGAACC TAGAAAGCAT GGTACACTGC
  R
  TGCAGGCTCT TAAAGCTTCC ACATGAGCCA CGTCACTTCC ACCCACATTT TACTGGCCAA
  AGCGGTTACT TATCTCAAAT CGTCAAGGAA GTATAATTCT TGAGTGTGGC TGGAAAGGGA
  AAGGGGTAGA TTGGGACAAC CTGACCAATG TGGCAAACTG TTGAAGTAGG AGTGTGTGTT
  TGTGTGTGTG TGTGTGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45473160	mCV23615512	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33861838					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133455314 () rs orientation: forward

Symbol	Name	Function Class
Gm64379	predicted gene, 64379	within coordinates
Rr398038	regulatory region 398038	96 bp downstream
Rr585594	regulatory region 585594	26 bp distal
Rr585595	regulatory region 585595	within coordinates
Rr585596	regulatory region 585596	1544 bp proximal
Tssr35771	transcription start site region 35771	12 bp upstream