rs33860721 SNP Detail

Summary

• ID
  rs33860721
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103115759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGCTTAT CTGTGAACTG
  TGCTCTATAG GGTATGGTAG CAAACATCTT TAATCCCAGT ATCTGGGAGG CAGAGGCAAT
  GAGATCTCTG TAAAATCAAG GCCAGCCTGG TCTAATGAGT GAACTCCTGC ACAGCCAGGA
  CTTTGTCTCA AGAAGGAAAA AAAAAAAAAA AAAAAAGTGT AGCTGAGTGT CTGTAATCTT
  Y
  GAGTTTGAGA CAGGAAGGCA AGGAGATCAA GAGTTCAAGG CCAGCTCAGG CTATATGAGA
  CCCTGTTTGT CTAAAAGCAA AGCAAAAACA AAACAAAATC TATGACAGGC ATGTTGCTCA
  GCGATTGAGC ATTGCTTGGC ATACACAAGG CCCTGGACTC AGTCACCAAC ACTGTAGAAC
  GATATCATCC AGGAATGGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45398114	mCV22896187	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss135560275	ENSMUSSNP3073233	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss320856691	CHEV_3_103012366	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33860721					SNP	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103115759 () rs orientation: forward

Symbol	Name	Function Class
2410024N13Rik	RIKEN cDNA 2410024N13 gene	within coordinates
Rr375503	regulatory region 375503	within coordinates
Rr397899	regulatory region 397899	1699 bp downstream
Rr582336	regulatory region 582336	1488 bp distal