rs33855801 SNP Detail

Summary

• ID
  rs33855801
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:119523109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTGCAAAAC AATTCCCAGA AACCGATCCT CTCTGTATGC
  CATGCGCATC GAAGACTTGG GCCTCTCAAT GGTTTAATGA CAAGCATTTC CCAATGGCAG
  Y
  TTTGCTGTAA GAGGCATGAC AAATAACTGC AGTGAGAGCC ACGTTGCAGA ACCAGTGGCT
  ACCTGGGCAG GAGAGGCGAG AACAGTGAGT GACTGGGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46441174	mCV25381189	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss147333267	ENSMUSSNP1902857	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33855801					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119523109 () rs orientation: forward

Symbol	Name	Function Class
Rr598629	regulatory region 598629	267 bp proximal
Rr598630	regulatory region 598630	1511 bp proximal
Rr598631	regulatory region 598631	1664 bp proximal