rs33795076 SNP Detail

Summary

• ID
  rs33795076
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:28021277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTGTAAAAC GACTCAAACA TTTTTTTATG
  CATTTCAGAA TAAATGGGCT TTGAAAAATT ACTTTTCTTC CTTTAAAGCA AGGACTCACT
  AAATGCAGTG CCGGGCACTT CTGTAGCTCA GGCAGGCCTT GGGACCCAAC TGTGTCAGCC
  R
  GGACTGTAGC TCTGACTGCC AATCTAGGAG TCCTTATCAT TTTATGACTA GCTTAggttg
  cacaggtgat acctgtgatc cagcacacca gaggctgaaa caggagaagc tgtaccactg
  tggtgccaga ctgggccagc atgggctaga                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48358672	NES12231322	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A		G	G	G	G		G
ss325349717	CHEV_17_27939248	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33795076					SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48358672	NES12231322	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28021277 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	Intron
Rr392473	regulatory region 392473	1078 bp downstream
Rr524311	regulatory region 524311	1744 bp distal
Rr524312	regulatory region 524312	827 bp distal
Rr524313	regulatory region 524313	728 bp distal
Rr524314	regulatory region 524314	1676 bp proximal