rs33783002 SNP Detail

Summary

• ID
  rs33783002
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:27351361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGTACAAT AATAGGAAAA
  AAAAAATTTA AAGGGCTTGA GATGTAATTC AAAAGTAGCA TTTGCCTACC ATAAGTGAGG
  CTTTAGGTTC TATCTTCCTT CACAAAAAGA ACTGTTTTCT TTATCTTGGC CAAGAAACCT
  CAGCTCCTTC CGAAGCAGAG CTAGATATAA CACTTGTTTC TGCCCGAGAT AAGCTTTGCT
  R
  TCGCGTGTGC TTGAGCAGCT TGTACACTGG AAGCACCAGG CCCTGCTTAG TCTTCTGCTC
  CCAATTCAGT CAGAATGTGT CCAAACATGT CTTGCCTGCA TTTCTTCAAT AAACATATCT
  TACTTTTTCT TAACCTTGTG TGCTATAATT CATACAATTC ATCAGGGTCA GAGAAATCTT
  ACACATACTT ATACTGAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47842872	NES11671276	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33783002					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47842872	NES11671276	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:27351361 () rs orientation: forward

Symbol	Name	Function Class
Grm8	glutamate receptor, metabotropic 8	Intron
Rr379109	regulatory region 379109	within coordinates
Rr627322	regulatory region 627322	within coordinates