rs33778711 SNP Detail

Summary

• ID
  rs33778711
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107469759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCTCCTTC CCTGTGGCTG
  TGGATGCCAC TGACCTGGAT TCATCTCATT GCCTTGGTCA GCAACACTGC CCCTCCTGGG
  TGGGGATGGG GGTTACAGGC TGGTTCAGGA TCTCAAGGTA TGGAGTCCCT GCCTGAAGTG
  AAATGTGACT GCCAGAAGTT CCTAGGTCCT CCCTTCCTGC CCTTCCCTCT GGAAGTCAGT
  R
  TGTCAGTGGA TGAAGGCTGC ACTTGGCTTC ATCACCTCCT GCACCCCCCC CCCCACCTCC
  CGTAAATCCT GGCGACACAA CAGGAAGGCC CTTTAACTAG CACATAAAAG TGCTTTGGGC
  TTTCAAAGGC CCCTGCTCTG TGTTTACAGG GGGCCCAAGA TTTTTATGGG CCATTTCCAG
  TCCTCCTTCC CTGACCCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46857339	NES10705738	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33778711					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46857339	NES10705738	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107469759 () rs orientation: forward

Symbol	Name	Function Class
Rr583003	regulatory region 583003	1316 bp proximal