rs33768264 SNP Detail

Summary

• ID
  rs33768264
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107288333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGCCCGGG CTGCAGCTGT
  TTGCCTCAAG GAGGACTCAA GCGGGGTGAA GCTGGTAAGA TCAAAGGCAA CTCCAGGCAG
  GAAAGAGACA GACAGCAACT CAGGCCCAGT GGGTCCGAGG ATTTCTACTA GAGGGCATAG
  AACAGAAGAC AGTGGGGATA CGGGGCCAAA GATGGTAGGT CAGTAAATGT GAGAAGGATG
  R
  ACTTACAGGA CACTGGTGAG TGTTAGTGTC TCAGGAGAGA CAGAACTAAT AGGCTGCATA
  TCTATATTAT GAGAGTGGAC ATAGTAAAGG AATTCATTGT CTTGTGTGGC TATGGACACT
  GAGAAGTTTC AAGATAAGCC ATTTGCAAGC TTGAGACCTG AGATGGAGTG GCACAGCTCA
  GTCCAAGTCC TCAAAAGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46854882	NES10713541	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33768264					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46854882	NES10713541	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107288333 () rs orientation: forward

Symbol	Name	Function Class
Gm40120	predicted gene, 40120	within coordinates
Rr582964	regulatory region 582964	1265 bp distal
Rr582965	regulatory region 582965	1412 bp distal