rs33767405 SNP Detail

Summary

• ID
  rs33767405
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107287779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGGGCAG AAGGGAGGGA
  GGGAGGCAGG CAGGGATATG GATGTGCCTG TCTGTGTATA TGCTCCCTTT CTCATTCCTC
  TGGCCTCCTT CTTGTCTTCC CCAGTTTATA GGTTCTTGAC CAAAGGCTAT GTCCCTTTCC
  CATCTCTCTG TGTCTGAAGG AGGCCTTGGG AACCCCCAAA TGGCCAGTAG CTTCCCTGAT
  S
  CACTCATTCC TAGTCCAGAG CTTCTTTAGC CACAGGCTTT GGGAGCAGCC CCGACTTTTT
  TCTGGGTGAG CTCTGCTTCT ACAGATCATG AGCCCATCCT GTCTGCAGCA GGCAAGCCTG
  GGGGCAGAAA CCAACAGCAA ATTGCTCTCC ATTCACTATC TCCCCCAAAA CACCTTAAAA
  TGATTGTTTT GGGCCTGAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46854873	NES10713538	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	C	G	G	G	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33767405					SNP	G	G	G	G	C	G	G	G	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46854873	NES10713538	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107287779 () rs orientation: forward

Symbol	Name	Function Class
Gm40120	predicted gene, 40120	346 bp upstream
Rr582964	regulatory region 582964	711 bp distal
Rr582965	regulatory region 582965	858 bp distal