rs33765305 SNP Detail

Summary

• ID
  rs33765305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:25273562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCTCTAT GGGGGAGCAG
  TCAGTCTTAG GCTGTAAACA TCCAGAAGGA GATAGCTGCA GCTGCCACTT TACAGACACA
  CACACACACA CACACACACA CACACACAGA GTTTATGAAC ACATGTGCTT GTACACATTG
  CCAACCTTTG CAGTTGGATC AGATCAGAGG AAGGTTCTGC TAGTTCAGGG CTTCATGCAT
  R
  CTCAAGGCTC CCTCAGCTCC CCACATAGGA GACTTCATAA TATTGCTTAC ATTATTACCT
  GGAGAAAAAC CTACTCTTTA GAAGTGATGT TCCACAAGCT TACATCTGAG GTAACGACTT
  AGAAGGTTTT ACATATCTTT TCTCTTCCTG AGAAATGACT ATTTATAATG TCTTTATAAT
  GTCTTAGGGA AGAACACAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46854205	NES10850877	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33765305					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46854205	NES10850877	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:25273562 () rs orientation: forward

Symbol	Name	Function Class
Rr374700	regulatory region 374700	within coordinates
Rr574284	regulatory region 574284	1405 bp proximal