rs33761037 SNP Detail

Summary

• ID
  rs33761037
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107135890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATCTGAC ATCAGACTAC
  ACCTATTGCC TTCTGTTAGA TCCTTACCTG AAGATGTTCA ATAACCCCAT GTCAGTGAAA
  AAAACTGCTC ACCACCACCT ACTTACATCA ATTAAGGAGT GTTTTTTCCT AAGATGTATA
  TGTGTTTAAA ATATCAAATA TTTAATCTCT AACAACATTA ATTGATAACA ATGTTTGTTT
  Y
  CCTCCTAATG TTGTAGCTGA TATCTGGTGT AAGTACTTTG AAGCTAATGT TTGCTGCCCT
  GTGGGAATTG AAAACAGCCT TGATTACAAT CATCACCCTG AACTGAATGG ACAGACCCCA
  TGGGGCACTG CACAGCTTGG AGGGGGTGGC CACAAGAAGT ACTGGATGGG ATGGGTCTAT
  CTGGGACAAA GTCTAAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46853307	NES10695793	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs33761037					SNP	C	C	C	C	C	C	T	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46853307	NES10695793	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107135890 () rs orientation: forward

Symbol	Name	Function Class
Rr582941	regulatory region 582941	730 bp proximal
Rr582942	regulatory region 582942	1550 bp proximal
Tssr31190	transcription start site region 31190	1882 bp upstream