rs33750885 SNP Detail

Summary

• ID
  rs33750885
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107111849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGTGAGCA AGAAATGACC GAAGAGAATC TCAGGCTCTT
  TGCAGCCCAA CTTCAGAATC GGTGCCTTGT TGAGCCACCT CTTCTATTTG CTGCCAGCTC
  W
  TGTAGGATGT CACTCCAAGC AAACATCTCT TCTAGGATGC AGGACTTGAC AGAAAAAATT
  GTCCAGGAGA CATATGTGCA AACACCCACT AGACTCCACA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ
ss46852716	NES10696175	PERLEGEN	MM_PANEL2	f	SNP	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ
rs33750885					SNP	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46852716	NES10696175	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107111849 () rs orientation: forward

Symbol	Name	Function Class
Rr582930	regulatory region 582930	1422 bp proximal
Rr582931	regulatory region 582931	1646 bp proximal
Rr582932	regulatory region 582932	1959 bp proximal