rs33749437 SNP Detail

Summary

• ID
  rs33749437
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107111560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAAGGAAA GAATTGGTGC AAAACTAAGA ATGTGTTTCT
  TTAAAAGTCA CAGCTTCATC CTACAATGTC CACCAACTTA AAGCAACTTG ATATCTCCCA
  R
  ACATTACCTG GATCCCCTGG TGGCTGTCCT GTGCTTCTGA CACCTCAACA TTTGCTGGGT
  TTGGAGGACT TCCAAGCTCA CAGACTAGCA GGGCCAGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss46852698	NES10696166	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G	G	G	A	G		G	A	G		G
ss135583276	ENSMUSSNP7156724	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						G
ss320864586	CHEV_3_107007162	CHEVERUD	SCREENING_POP	f	SNP												G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs33749437					SNP	A	A	G	G	G	G	G	G	G	A	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46852698	NES10696166	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107111560 () rs orientation: forward

Symbol	Name	Function Class
Rr582930	regulatory region 582930	1711 bp proximal
Rr582931	regulatory region 582931	1935 bp proximal