rs33738552 SNP Detail

Summary

• ID
  rs33738552
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165842181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATT TAATGCTTTT GGACAAAGGG
  R
  AAAAAAAAAA AAAAAAAAGT CCATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss45315350	mCV23746351	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss148248062	ENSMUSSNP2814919	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs33738552					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165842181 () rs orientation: forward

Symbol	Name	Function Class
Ncoa3	nuclear receptor coactivator 3	Intron
Rr2018	regulatory region 2018	16 bp proximal
Rr570103	regulatory region 570103	within coordinates
Rr570104	regulatory region 570104	441 bp proximal