rs33727195 SNP Detail

Summary

• ID
  rs33727195
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:165343476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAACTGAA GTCCCCCTGA
  AACCATGAGC CAACCTAACC CTTCACTCCC ATAAGTCAAT GCTCTTGGTT ATTTTTGGCT
  GAGAATTGCA AAAGAGTCTC AGGCAAGTGT GCCGTCTCCC TTGGCCTCAA TTTTTTTTTA
  TTAGATATTT TCCTCATTTA CAATGGCCTC GATTTTCTTG TCCCCCAACA TGGAGTTAGA
  Y
  TGTGGCGATT CCTACCTCCT TAGGCTCCGG TGGGGTTAAT GAGGAGGTAA AACACTAACG
  ATATTAGGTA ATTATCAAAA GTAGATTCTC TCGATGGTTT CGGTGCTCAG TCCAGTTATT
  ACTGCTGTAC AAATTGATGC AGCTCGATCA AGCATTTATT AAACTCATGC ATGGGACATG
  GGGGGCTTAA ATTCTATCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45313376	mCV22598488	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss148240504	ENSMUSSNP2398452	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
ss320608179	CHEV_2_165327056	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33727195					SNP	C	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165343476 () rs orientation: forward

Symbol	Name	Function Class
Rr569936	regulatory region 569936	1741 bp proximal