GGGACTCAGA AAAGGTTGAG GCGCGCCTCC GAGCTACTCG GGAGCGCGCC CCGGGGCTCC GCCCAGGCTC CTACAGTGGG CCTGTTCTGC ACTTTGAGGC TGGAGCTGGC TGGTCGGGGA CAGGAAAGAA GGTGAGTGGG AGGGGGAAAA GTGCCTGGCC TGGCGCTCGG CAGGTTTTCT ACTTGGGTGC TGTGTCGAAG K GTGGTTCGCA AGCCAAGAGC GAGGGCACAA CGCGAGCCCC CTTGGTCCCA CGGGCGCGCG AGCCACGCGA ACCTCGGTAG CTTCACCTGG TTCCGTGAAC TTCGTGACAC CCACGACTAG AGTCGCGAGC CAGCTCCGGG AACCCACGAA TCACGGGAGA TGACAACTAG GCTGAGGTCT CCGCGTCCTA CTTTTTCTCT K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46848322 | NES10713742 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | T | T | T | T | G | T | T | T |
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
||||
rs33718694 | SNP | T | T | T | T | T | T | T | T | T | T | G | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss46848322 | NES10713742 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr3:106455306 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cept1 | choline/ethanolaminephosphotransferase 1 | 188 bp upstream | ||||||
Cpgi13666 | CpG island 13666 | within coordinates | ||||||
Dram2 | DNA-damage regulated autophagy modulator 2 | Intron | ||||||
mRNA-UTR | ||||||||
Rr375539 | regulatory region 375539 | within coordinates | ||||||
Rr582855 | regulatory region 582855 | 419 bp distal | ||||||
Rr582856 | regulatory region 582856 | 108 bp distal | ||||||
Rr582857 | regulatory region 582857 | within coordinates | ||||||
Rr582858 | regulatory region 582858 | 1064 bp proximal | ||||||
Tssr31115 | transcription start site region 31115 | 276 bp downstream | ||||||
Tssr31116 | transcription start site region 31116 | 252 bp downstream | ||||||
Tssr31117 | transcription start site region 31117 | 102 bp downstream | ||||||
Tssr34980 | transcription start site region 34980 | 1818 bp upstream | ||||||
Tssr34981 | transcription start site region 34981 | 412 bp upstream | ||||||
Tssr34982 | transcription start site region 34982 | 397 bp upstream | ||||||
Tssr34983 | transcription start site region 34983 | 267 bp upstream | ||||||
Tssr34984 | transcription start site region 34984 | 209 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/25/2025 MGI 6.24 |
![]() |
|