rs33713807 SNP Detail

Summary

• ID
  rs33713807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106381137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAGC AAAGTAAATA
  AACAGAGCAA AAAGAAAGAG GGCAATTGGG GGAATGAGGG AGGGAAAGAG GAAGGAAAAG
  GGGGAGGAAG GAAGAAAGGA AGGAAGAAGG GAAGGAAAAC AGAAAGAAAG AAATGATTTG
  CAGTAGAGGG AACTATGAGG AATAGATGAA GAATAGTATA AGGAGTGACA ACATGCCCCA
  R
  AATGAGACCA GGCCAGAGGA TAAACAGAGA GTAAACCAAT TACAGGAGAT CTTCATTCAA
  GAAGAGACTT CTCCAAAACT AGAAAGGAGC AACCTAGTAG GTATGGGGCA GGTGCCTTTG
  TCTGGGACAA CAATTTGCAA AGCTGGATTC AGGTGTTCTC TGTCTCAGTA TAAAAGAGCA
  TCTTTGTTTA ATGTGCTTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46847665	NES10717140	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33713807					SNP	G	G	G	G	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46847665	NES10717140	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106381137 () rs orientation: forward

Symbol	Name	Function Class
Rr582843	regulatory region 582843	364 bp proximal