rs33713804 SNP Detail

Summary

• ID
  rs33713804
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:106381114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACCCTATT TAAAAAAAAA
  AATAAAAAAA AGCAAAGTAA ATAAACAGAG CAAAAAGAAA GAGGGCAATT GGGGGAATGA
  GGGAGGGAAA GAGGAAGGAA AAGGGGGAGG AAGGAAGAAA GGAAGGAAGA AGGGAAGGAA
  AACAGAAAGA AAGAAATGAT TTGCAGTAGA GGGAACTATG AGGAATAGAT GAAGAATAGT
  R
  TAAGGAGTGA CAACATGCCC CAGAATGAGA CCAGGCCAGA GGATAAACAG AGAGTAAACC
  AATTACAGGA GATCTTCATT CAAGAAGAGA CTTCTCCAAA ACTAGAAAGG AGCAACCTAG
  TAGGTATGGG GCAGGTGCCT TTGTCTGGGA CAACAATTTG CAAAGCTGGA TTCAGGTGTT
  CTCTGTCTCA GTATAAAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	FVB/NJ	NZW/LacJ	WSB/EiJ
ss46847662	NES10717138	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	FVB/NJ	NZW/LacJ	WSB/EiJ
rs33713804					SNP	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46847662	NES10717138	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:106381114 () rs orientation: forward

Symbol	Name	Function Class
Rr582843	regulatory region 582843	387 bp proximal