rs33707606 SNP Detail

Summary

• ID
  rs33707606
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:145799046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGGT CCTCTGGGAG AGCAGCCAGC
  R
  CTCCTAACCA CTGAGCCACC CCTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45311450	mCV22530665	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss147850440	ENSMUSSNP5907789	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs33707606					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:145799046 () rs orientation: forward

Symbol	Name	Function Class
Cfap61	cilia and flagella associated protein 61	Intron
Rr397368	regulatory region 397368	341 bp upstream
Rr566613	regulatory region 566613	87 bp distal
Rr566614	regulatory region 566614	241 bp proximal
Rr566615	regulatory region 566615	497 bp proximal
Rr566616	regulatory region 566616	916 bp proximal