rs33698025 SNP Detail

Summary

• ID
  rs33698025
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:24123665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTATGTT TAACAGCTCA
  AGTCCTTTAT TTCTCTTGCA TTCTTCTTTT CCTGCATTTA CTAGACAAAG AAAAGCTAGT
  TTGACAGCTT TCATAAGCAA AGTACACTTA GAAGAAAAGA ATTACTGTTT ATAAATTAAA
  TCATTATTTC ATTCAGCATC ATCTTCTAAC CTCAGCTGGG TAGAAAGAAT CCATCCTCCT
  R
  GTTTACCTGG GGTTGGACAT ACAGAGGTTT CTCCACTACA GTCATGGTAC TTACCACTGT
  AAAAAGTTTC TCATTACAAA CACTATGTCT GTGTCACCCA TTATAGACTC AGTATGTCAA
  ACTCATTTGG CTACTGGAAG CCTGAGTAAA TGGCCCATTG ATAAGTCTAC CTGTGAGGAT
  CATATTGAAT GAGATTGTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46844900	NES10860186	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33698025					SNP	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46844900	NES10860186	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:24123665 () rs orientation: forward

Symbol	Name	Function Class
Naaladl2	N-acetylated alpha-linked acidic dipeptidase-like 2	Intron
Rr574256	regulatory region 574256	1015 bp proximal