rs33697312 SNP Detail

Summary

• ID
  rs33697312
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:24123643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTAAATC TTTTAAATAA
  CATGTTTATG TTTAACAGCT CAAGTCCTTT ATTTCTCTTG CATTCTTCTT TTCCTGCATT
  TACTAGACAA AGAAAAGCTA GTTTGACAGC TTTCATAAGC AAAGTACACT TAGAAGAAAA
  GAATTACTGT TTATAAATTA AATCATTATT TCATTCAGCA TCATCTTCTA ACCTCAGCTG
  R
  GTAGAAAGAA TCCATCCTCC TGGTTTACCT GGGGTTGGAC ATACAGAGGT TTCTCCACTA
  CAGTCATGGT ACTTACCACT GTAAAAAGTT TCTCATTACA AACACTATGT CTGTGTCACC
  CATTATAGAC TCAGTATGTC AAACTCATTT GGCTACTGGA AGCCTGAGTA AATGGCCCAT
  TGATAAGTCT ACCTGTGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46844897	NES10860185	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33697312					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46844897	NES10860185	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:24123643 () rs orientation: forward

Symbol	Name	Function Class
Naaladl2	N-acetylated alpha-linked acidic dipeptidase-like 2	Intron
Rr574256	regulatory region 574256	1037 bp proximal