rs33695684 SNP Detail

Summary

• ID
  rs33695684
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:101010784 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT ATTAGGCCCT GGCTCTTAAA
  S
  ATTCCACCAA CTCCCCAAAA CACTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45809768	mCV22946878	ABI	CRAMUS_MOUSE	f	SNP	C	G	C
ss148929957	ENSMUSSNP5470269	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss321627765	CHEV_5_101291937	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33695684					SNP	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:101010784 () rs orientation: forward

Symbol	Name	Function Class
Gm73351	predicted gene, 73351	509 bp downstream
Gpat3	glycerol-3-phosphate acyltransferase 3	Intron
Rr378349	regulatory region 378349	within coordinates
Rr615578	regulatory region 615578	1381 bp distal
Rr615579	regulatory region 615579	892 bp distal
Rr615580	regulatory region 615580	737 bp distal
Rr615581	regulatory region 615581	1409 bp proximal
Tssr47495	transcription start site region 47495	897 bp downstream