rs33695084 SNP Detail

Summary

• ID
  rs33695084
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:121246445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAT CTATTTTAAC AGTTGTAAAA
  W
  TTTTTTTAAA TTTGTTAGTT TGCTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45310386	mCV22585538	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss147385604	ENSMUSSNP604511	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320483072	CHEV_2_121241700	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33695084					SNP	T	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121246445 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pdia3	protein disulfide isomerase associated 3			Intron
				Noncoding-Transcript-Variant
Rr397248	regulatory region 397248			1998 bp downstream
Rr563816	regulatory region 563816			1682 bp distal
Rr563818	regulatory region 563818			1750 bp distal
Tssr19756	transcription start site region 19756			1994 bp downstream
Tssr19757	transcription start site region 19757			1313 bp downstream