rs33691264 SNP Detail

Summary

• ID
  rs33691264
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:21837384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATGTCCG GAAATATTGA
  AGCTATACAG GAAATTCCTC AGTGCCAGAC AAAATTAGCA GATCACAGAT TCTCAGTCTT
  GTCTGTACAC TGGAGTCACT GAGGTCTCAA ACAAATCCTG AGCCCACAAT AGACCTTGGA
  GTAGCAAGAG TGTGTCGGTC CTACTATATT CACAATCCAT TTGCAGTGCT GAGGACTACT
  R
  CAGCAGCAAA AGGCTGAGAG ACGTGTAGAA AATGAAAAGT TTGGACTGCA TATACCAGAC
  CCAACCACCC TTCCACTTCA ATAAAGGAGG CAATCAGACA CTGTGGGTCT CGGGGTTTGA
  GCAATCAGCT GTACCCAGAA ATATATATGG GTGTATGTGT GTGTGTGTGT GTGTGTGTAT
  ATACATATAT ATATGACAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss47829184	NES11689634	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A		G	A	G		G
ss321763611	CHEV_6_21787385	CHEVERUD	SCREENING_POP	f	SNP										A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs33691264					SNP	A	A	A	A	A	A	A	A	A	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47829184	NES11689634	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:21837384 () rs orientation: forward

Symbol	Name	Function Class
Rr627016	regulatory region 627016	1969 bp proximal
Tspan12	tetraspanin 12	Intron