rs33686390 SNP Detail

Summary

• ID
  rs33686390
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103667098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTG TGTGTGTGTG TGTGTGTGTG
  Y
  GCGCGCGCGT GGTGTGTGTA GTACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45308356	mCV22332959	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss320442858	CHEV_2_103676910	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs33686390					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103667098 () rs orientation: forward

Symbol	Name	Function Class
Gm13877	predicted gene 13877	348 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr561946	regulatory region 561946	1926 bp proximal