rs33682295 SNP Detail

Summary

• ID
  rs33682295
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:102389063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCACTCA AAAGGAATAG
  ACCATTGAAG ACTATCTTAC CACTACAGAA GAAAGAGCAA AGGGGGCATT TTAAAGTCCA
  AACAAGTATA GGCTTCTTTA TGTACTTTTT AATAAAAAGT ACGGGCAGAA TCTGATGTTG
  TTGCTACTAG TACTTGCTAA GATGTTGGAA GATTGCTACA GAAGATGATG CATCCATGGT
  M
  CTGTAAAAAA ATCTGGCTAG CATTGAGCAG CATGCCATTC AAGTTGCTTT AAGCAATGTG
  ACTGGCCTGG GATTGTTGGG CACTCTGGGG TGTGAATCTG ATTAATGAAT ACTCACACTG
  ATCTGATAGT TCTGAGGACT GAGAAGCCTT GTGACTTGCC TTCTCAACTA GATGCAGCTC
  CTCTTTAGGA ACAACAGGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45308400	mCV23730715	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss147115658	ENSMUSSNP5746480	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320438853	CHEV_2_102398875	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs33682295					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102389063 () rs orientation: forward

Symbol	Name	Function Class
Pamr1	peptidase domain containing associated with muscle regeneration 1	Intron
Rr561705	regulatory region 561705	220 bp proximal