rs33676766 SNP Detail

Summary

• ID
  rs33676766
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165949873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCCATCAA CTATAGGAAA
  TTCCCATTAC CTCAGGGAGC GTGACATATC AGACCCCTCG GAGCTGCTCT CAGAGGTATC
  TCACCAATGG CCCTTTCCTA TAATAATGAG TTTGCCGTAT TTCCTCCCAA AAGGAATTCA
  CAGTCGAAAA ATAATTTCCT ATGCCAGTCA TCTCCCAAAG TTGAAAGAAC ATTAGAACAG
  Y
  AATCTTCAAG AAAAATAAAA GCTGGGAGAT TTATAACAAA GGGAGGCTTC AACCGGAAAC
  GTCTCTGGCA CATCCGTCAA GGAGACATGA GGTGGCAGTC AGGTGCCAGC AAGGAGACAG
  ATTCCCTGGG AGGCTGCTGG TTCCCAGCGC AGGCTGGTGG GCGCTTGGTA TTTGCAATTC
  AAATACTGGT TGCCCCTGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45308104	mCV23749420	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss148249583	ENSMUSSNP7020413	ENSEMBL	ENSEMBL_Sanger	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33676766					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165949873 () rs orientation: forward

Symbol	Name	Function Class
Rr570135	regulatory region 570135	1592 bp distal
Rr570136	regulatory region 570136	933 bp distal
Rr570137	regulatory region 570137	443 bp proximal
Sulf2	sulfatase 2	Intron