rs33676362 SNP Detail

Summary

• ID
  rs33676362
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172124620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAAAAAGT CCCTCTCCCT TTCCCTGGGT GCCTTTTTCT
  CTTGGGACCC AGAAATTCCA CCTGTACCAT CTGCCCAGCA ATTCCCCGCG CCCCCTCCCC
  Y
  GCCCAGCCCC TTCCTTCTTT ACTGACAAGT CAATAACCAA TTAGAGAACT AGTCCTTAGT
  ATCAGCACCT CCCCTTACAA ACTCCTACAA GTTATTCTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45307447	mCV24576673	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss148312876	ENSMUSSNP3371018	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33676362					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172124620 () rs orientation: forward

Symbol	Name	Function Class
Gm74903	predicted gene, 74903	103 bp upstream
Rr571639	regulatory region 571639	114 bp distal
Rr571640	regulatory region 571640	within coordinates