rs33676195 SNP Detail

Summary

• ID
  rs33676195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:152787142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTAGGTC TTAAGAGAGC
  TACCCCTTGG GCCTAGCCAG AACGCTTGGT GAGATGTCAT GGGATGGATG GCATCTCTGG
  GTCAGGAGCA CTGGAGAAGA CTCAGAGACC TAGCCCTGCA TTCATGCTTC AAAGGCCTGC
  AGGGGAGGAA AGCAGATGCT AGATTGATTG GTCTATGGGA CCTCATCAAG CTCCTTCAAC
  R
  GCCCCATCAA CATGATGTTT ATTCCCCCAT TTTACAGATA AGGAAACTGA GTCTCAGGGA
  AACACAGTTG CTGGACTATG GCCATCCAGC TGCTAGGAGT GATGGACCTC TGAGTGACCT
  GTCCGGATGA GTGACAGCCT GTCAGCACGG TGACAGGCTG GAGGGGACCT GCCCAACAGG
  ATAGGCATGC ATTTGAGAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45307537	mCV23536536	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss147977591	ENSMUSSNP6038340	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33676195					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152787142 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dusp15	dual specificity phosphatase-like 15			Intron
				Noncoding-Transcript-Variant
Rr567513	regulatory region 567513			1531 bp distal
Rr567514	regulatory region 567514			1421 bp distal
Rr567515	regulatory region 567515			1896 bp proximal