rs33673713 SNP Detail

Summary

• ID
  rs33673713
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172198056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTACTTCAA CAAAGCCTTA
  GCACAGGACG GATGACTAGA GGCCTCTTGT CCCAAGAGGA TAGACTTCCA CTCAGGCATG
  TTCTCAAGTT CCTGATGGTG GTCCAGTTGG CCATGAAAGC CTGTTTCTCT AATTCCAAGT
  TCCCCCTCTG GTTGATGGAC AGATGGCACT GGCCACTATC CAGCAGGCCA GAAAAACACC
  M
  GTCGCTCATG GCTAGCCAAC AGTGAAGAGA TACTCAAATG ATTACCCACG TACTCCAGGT
  AGATGGTATA CATATATATT TAACAAGTTT GCATACATGA CAGAACTCCA ACATAAAAAA
  TAGCCTTTAA CATGCAGAAA AAGAAACCCC CGAGTCAGGT CTCAAGACAA GGCACAGGCT
  CCGTAGCAGT GGCTGAGGAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45307314	mCV23771694	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	A
ss148314503	ENSMUSSNP3195817	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		A
ss320618313	CHEV_2_172181636	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33673713					SNP	C	C	C	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172198056 () rs orientation: forward

Symbol	Name	Function Class
Aurka	aurora kinase A	54 bp downstream
Fam210b	family with sequence similarity 210, member B	387 bp downstream
Rr571656	regulatory region 571656	717 bp distal
Rr571657	regulatory region 571657	within coordinates