rs33667678 SNP Detail

Summary

• ID
  rs33667678
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127996538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACC TTTAGTTGTG ATGTGGTTGT
  Y
  ACTCCAAGCC CCCCTCGCTG GGGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45306437	mCV23908275	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss147553385	ENSMUSSNP6756085	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320501664	CHEV_2_127980354	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs33667678					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127996538 () rs orientation: forward

Symbol	Name	Function Class
Bcl2l11	BCL2 like 11	Intron
Rr367305	regulatory region 367305	1524 bp downstream
Rr367306	regulatory region 367306	1638 bp upstream
Rr564661	regulatory region 564661	678 bp distal
Rr564662	regulatory region 564662	880 bp proximal
Rr564663	regulatory region 564663	1503 bp proximal