rs33660327 SNP Detail

Summary

• ID
  rs33660327
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172122852 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAGAGGTA AATTTGAATG
  TTACTAGATA GGTAACATTC TTACTGAATT CCAAGCTCAG GGTCGGCTTC AAGAACTCCC
  TAGGACATTG GAACCTAGTG GAGGCTTAGA AATATATCAA AATCAATTCT TAAAGGCACT
  TATAATAAAA CAATACTGAA AGAGAGCGCA CGGATCCATA CACCAGACTA ACTGGGGACA
  R
  GTTTTGAGTA ATACGTGCTA TTGGAATGCC AAGGTTCCAG GAGGCTAAGT TTCCGTGAAA
  CTCTTTGCCT CAGGACTGCT TCCAGGTTTC TAGGCCTCTC ACGAGAGTCA CTACTGGAGT
  GGATGTAGCA CCCCATGGTG GCACCAGTCA CTGTGAGCTG GGCCCTCCCA CATCAGTCAC
  TGATTAAGAA AACGCCCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45305647	mCV24576683	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	G
ss148312871	ENSMUSSNP4857239	ENSEMBL	ENSEMBL_Sanger	f	SNP			A		G
ss320618004	CHEV_2_172106432	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33660327					SNP	A	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172122852 () rs orientation: forward

Symbol	Name	Function Class
Gm74903	predicted gene, 74903	within coordinates
Rr571639	regulatory region 571639	1146 bp proximal
Rr571640	regulatory region 571640	1655 bp proximal