rs33648970 SNP Detail

Summary

• ID
  rs33648970
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131096902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGAAGTTT GACACAATGC CGAAATGCTT ACCTAGCTCT
  GTGTTTGATC CTCAGTGTGA AAAGTTTTTT CTCTCAATCA AAAGTAATTA GTAGCTGGGC
  R
  TGGTGGCACA CGCCTTTAAT CCCAGCACTC GGGAGGCAGA GGCAGGCAGA TTTCCGAGTT
  CGAGGCCAGC CTGGTCTACA AAGTGAGTTC CAGGACAGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45303672	mCV25352537	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss147601945	ENSMUSSNP4330766	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33648970					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131096902 () rs orientation: forward

Symbol	Name	Function Class
Gm75131	predicted gene, 75131	within coordinates
Rr397320	regulatory region 397320	734 bp downstream
Rr565224	regulatory region 565224	240 bp distal
Rr565225	regulatory region 565225	795 bp distal
Rr565226	regulatory region 565226	802 bp proximal
Rr565227	regulatory region 565227	909 bp proximal