rs33648875 SNP Detail

Summary

• ID
  rs33648875
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102633200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTAGCAAGA ATATATGCAT CAATTTATCT CTGTCTTGAC
  TGTAGATGCA TTTTTTCTAG ATGTTTGAGT TTCTTCCCTG ACTTTTCTTA CAACAATGGA
  M
  TGTAATCTAG ATTTGTAAAC CAAAGTAAAC CCTTTCTTTC CTAAGTTGTT TTTTTTTTCA
  CCAAGGTATT TTATCCCAGC AACAGGAGTG AAATCAGAC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45304233	mCV25049823	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss147124418	ENSMUSSNP6963347	ENSEMBL	ENSEMBL_Sanger	f	SNP				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33648875					SNP	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102633200 () rs orientation: forward

Symbol	Name	Function Class
Rr561739	regulatory region 561739	1100 bp proximal
Rr561740	regulatory region 561740	1193 bp proximal
Rr561741	regulatory region 561741	1286 bp proximal
Rr561742	regulatory region 561742	1384 bp proximal