TTAGAGACAT AGAGGTGGAC TGGATGGACA ATGCTCTCCC CTCCTCCCCT CACACTCTCC CAGAAGCTCT CGCTCTCTCA CCTTTGGGTC CTTGAGCCTC ATCATCACTG TCGGAGCTGT CATTACTCAC GATGTGCTTT GCTGTAATAT TTTCTATGGG AAGAAGACAA AATCATTGAG ACATCTTGGG GATCAGATTC M CAACTAAATT TACGGGGCAG ACGAGGGAGT ATTGGTGCAA GTCTTTAATT CCAGCTCGCA GGAGGTGGGG GCAGGCAGAA CTCTCCGGGT TCAAGGCCAG TTCCAAGCCA ACCAGAGCTA TGTGGTGGTC GCATTCCTTT TTAACTGTGG AGAAGTGATC AGAGCAAAAC TACAGGAGGA GGACTACTGT GTCTCCCTGG M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss49510994 | NES12852295 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | C | A | A | A | C | A | C |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
||||
rs33647945 | SNP | A | A | A | A | A | A | C | A | A | A | C | A | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49510994 | NES12852295 | PERLEGEN | MM_PANEL | f | SNP | A/C |
Location: Chr1:149736925 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pla2g4a | phospholipase A2, group IVA (cytosolic, calcium-dependent) | Intron | ||||||
Rr420110 | regulatory region 420110 | 1636 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/25/2025 MGI 6.24 |
![]() |
|