TTAACTTCTG ATTTTTTTTG CCAACACTGA AAACCATCTG TCGGTTTCCA GTATGTGAAT AATTTGTCTT TTTTTTTCTT TTCAAAGCAT ACTAAGACCA GCCATGAAAG CTAAGAAGCA CTACATAGCC TTAATATCAA CATAGTGGTA AAAGCTGGTC TAACATTTCA CCATCCTTTT CCCAGGGGAA ATGCATCTAA Y TTGTGAAACC TGACAACTAT TCTTGTGATT AATATTTGCA GAAAAATCAG ACTTTCTGCT GGTTCATGTG AACTATGCTT CGTAGTGACT TTTTCTTTTT CTTTGCTAGC AAATAGAAAA GACTATATTT TTTTATTCAA TTTCAATACA CTAGATCCAA ATTTAGCAAT TTTACTCACA AGAACCACTT GGGAAAACGC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss49510982 | NES12852312 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | T | T | T | T | C | T | T | C |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs33646924 | SNP | T | T | T | T | T | T | T | T | T | C | T | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49510982 | NES12852312 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr1:149737607 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pla2g4a | phospholipase A2, group IVA (cytosolic, calcium-dependent) | Intron | ||||||
Rr420110 | regulatory region 420110 | 954 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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